It depends. If you are using Windows netork services (as in the ones that come with it - such as file and print sharing) then you need to make a choice. If the server is run apart from the main windows ones (AD, Access, SQL, IIS) and isn't dependent on these, then you do not need to complete this server setup, just install the TAM server on the machine and it should set up a service (if thats how it works) If it is dependent on logons from AD, then you need to set that up as well.
So you see it is quite possible that this server you want to set up may not be included in the MS wizard as it is a third party program. If you pst more details of it then we can help more, such as how the client-server thing actually communicates (netbios, IP port, monitoring file changes etc) and what else the machine needs to do.